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- Bobby Duke Middle School – Coachella
- Cahuilla Desert Academy – Coachella
- Colonel Mitchell Paige Middle School – La Quinta
- Coral Mountain Academy – Coachella
- Desert Chapel Christian Schools – Palm Springs
- Desert Christian Academy – Bermuda Dunes
- Desert Ridge Academy – Indio
- Desert Springs Middle School – Desert Hot Springs
- Horizon School – India
- Imagine Schools – Coachella
- Indio Middle School – Indio
- James Workman Middle School – Cathedral City
- John Glenn Middle School – Indio
- La Quinta Middle School – La Quinta
- Nellie N. Coffman Middle School – Cathederal City
- Paige Middle School – La Quinta
- Painted Hills Middle School – Desert Hot Springs
- Palm Desert Charter Middle School – Palm Desert
- Palm Desert Middle School – Palm Desert
- Palm Valley School – Rancho Mirage
- Raymond Cree Middle School – Palm Springs
- Sacred Heart School – Palm Desert
- Thomas Jefferson Middle School – Indio
- Toro Canyon Middle School – Themal
- Woodrow Wilson Middle school – Indio
- Others nearby:
- Twentynine Palms Junior HS – Twentynine Palms